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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015821912.1_cds_XP_016500911.1_14697
CDS Infomation

[gene=LOC107819324] [db_xref=GeneID:107819324] [protein=probable glucan endo-1,3-beta-glucosidase A6] [protein_id=XP_016500911.1] [location=join(9354..9417,9511..10809,11619..11656)] [gbkey=CDS]
Sequence

ATGATGGGTTGTTTATCTACTACTTTGCTTCTGCTATCTTTCCTTGCTTTTGCTTCTTTC
TCCAGTGCAGAAATCTCATCTAAAGTAGGAATATGCTACGGACAACTTGGGAACAACCTC
CCTCTACCAACAAAATCAGTTGACTTAATCAATGGTCTCAAAGCCAATAGAGTCAAGATC
TACGATGCAAACCCAGAAATCCTTAAAGCCTTCAAAGGCACAAAAATTCAAGTTTCAGTC
ATGGTCCCTAATGAGCTTATCAACAACATTTCTACAAATCAAGACTTAGCAGACCAATGG
GTCAAAACCAATGTTGTACCATTTTACCCCGACACTATGATCCGTTACCTCCTTGTTGGA
AACGAAATCCTAAGTAACCCACCCAACACCACTTGGTTCAACCTTGTACCTGCCATACGC
AAAATCAGATACTCTGTCAAAAAATTTGGTCTCGGAAAAATCAAAGTTGGTACACCATTA
GCTATTGACATGCTTGAATCTTCTTTCCCACCTTCTAATGGTACATTTAGGTCCGACATT
TCGGAAAAAGTCATGATACCATTGTTACATTTTTTGAATCGAACCAAATCATTCTTTTTC
ATAGATGTTTATCCTTATTTTGCTTGGGCAGCTCAACCTACAGTAATTAATCTTGACTAT
GCTTTGTTAGAGTCCAAGAATATTACTGTTACGGATCCGGTTTCGGGTTTAACCTATACG
AATTTATTGGACCAAATGATTGATGCAGTGTATTTCGCTATGAAGAGGGTGGGCTACCCG
GATGTTCGGTTATTTATTGCCGAAACGGGTTGGCCCAATGCTGGTAATGTAGACCAAATT
GGAGCGAGCATCTATAATGCAGCAACGTACAACAGGAACGTGATTAAAAAGTTTACAGCT
AAGCCACCTGTGGGAACGCCAGCAAAACCAGGAGTTATCGTGCCGACATTATTGTTTGCT
TTGTACAACGAGAATCAGAAACCGGGTCCGGGTACGGAGCGGCATTTCGGGTTATTGTAC
CCGAATGGGACGAATATATACGAGATAGACTTGTCGGGAAAGACGCCATTGTCGGAATAT
GAGCCATTGCCGAGGCCGAGGAACAATGAGCCATACAAGGGGAAAATCTGGTGCGTTGTT
GGGAGAAAAGCGAGTGTAACAGAAGTGAGTGGAGCATTAGCATATGCATGTGGGCAGGGT
AATCGGACCTGTGATGAGATCCGACCCGGAGGAAAATGTTACAAACCGAATTCTTTGGTG
TTACATGCGAATTACGCATTCAGTTCTTATTGGGCTCAGTTTAAGTCAGCCGGAGGAACT
TGTTATTTCAATGGGCTTGCTATTCCGACCAAAAGTGATCCAAGTTATGGAGCTTGCAAG
TTCCCAAGCGTCACACTTTGA

Peptide Sequence

PEP ID

XP_016500911.1
PEP Infomation

PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Nicotiana tabacum]
Sequence

MMGCLSTTLLLLSFLAFASFSSAEISSKVGICYGQLGNNLPLPTKSVDLINGLKANRVKI
YDANPEILKAFKGTKIQVSVMVPNELINNISTNQDLADQWVKTNVVPFYPDTMIRYLLVG
NEILSNPPNTTWFNLVPAIRKIRYSVKKFGLGKIKVGTPLAIDMLESSFPPSNGTFRSDI
SEKVMIPLLHFLNRTKSFFFIDVYPYFAWAAQPTVINLDYALLESKNITVTDPVSGLTYT
NLLDQMIDAVYFAMKRVGYPDVRLFIAETGWPNAGNVDQIGASIYNAATYNRNVIKKFTA
KPPVGTPAKPGVIVPTLLFALYNENQKPGPGTERHFGLLYPNGTNIYEIDLSGKTPLSEY
EPLPRPRNNEPYKGKIWCVVGRKASVTEVSGALAYACGQGNRTCDEIRPGGKCYKPNSLV
LHANYAFSSYWAQFKSAGGTCYFNGLAIPTKSDPSYGACKFPSVTL

Transcript Sequence

Gene sequence data has not been registered.